STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0714ATP-binding region, ATPase-like:Histidine kinase A. (395 aa)    
Predicted Functional Partners:
Q91_0715
Sigma 54-dependent transcriptional activator containing CheY-like receiver domain.
 0.994
Q91_1427
Diguanylate cyclase.
 
0.941
Q91_0626
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
0.940
barA
Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A.
 
 0.918
Q91_1906
Dihydrolipoamide dehydrogenase protein.
   
 0.878
Q91_0484
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
 
0.869
Q91_1431
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
 0.842
fliE
Flagellar hook-basal body protein FliE.
 
   0.813
cheY
Osmosensing histidine protein kinase SLN1.
 
 
 0.807
Q91_0483
Histidine kinase protein.
  
 
 
 0.804
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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