STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0732Cyclic diguanylate phosphodiesterase domain protein. (612 aa)    
Predicted Functional Partners:
Q91_1427
Diguanylate cyclase.
 
 
0.984
Q91_0626
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
 
0.983
Q91_1431
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.954
Q91_1519
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.939
barA
Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A.
  
 0.923
Q91_1362
Type IV pilus assembly PilZ.
    
   0.850
Q91_1780
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.841
Q91_1128
Response regulator/GGDEF domain protein.
 
 
0.837
Q91_0486
Hybrid histidine kinase.
 
 0.820
Q91_1872
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor.
 
 
0.806
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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