STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompWOmpW family. (221 aa)    
Predicted Functional Partners:
Q91_0104
Oxygen-independent coproporphyrinogen III oxidase HemN; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.861
Q91_0752
Cytochrome c oxidase, cbb3-type, subunit II.
  
    0.810
Q91_0753
Cytochrome C oxidase transmembrane protein; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.692
Q91_0748
Cytochrome c oxidase accessory protein CcoG.
 
    0.675
Q91_1838
Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.453
Q91_0574
Universal stress protein UspA and related nucleotide-binding protein.
  
  
 0.410
Q91_0762
Ring hydroxylating dioxygenase beta subunit.
       0.401
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.