STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0819TPR repeats containing protein. (209 aa)    
Predicted Functional Partners:
Q91_0816
Hemolysin delta-VPH.
 
   
 0.894
Q91_0818
Carbamoylphosphate synthase large subunit.
 
     0.894
Q91_0817
Long-chain acyl-CoA synthetase.
 
     0.893
Q91_0821
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
 
     0.841
Q91_0823
Iron permease FTR1 family.
 
     0.816
Q91_0232
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.801
Q91_0822
Hypothetical protein.
 
     0.790
Q91_0820
Two-component system, OmpR family, response regulator; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein.
     
 0.732
Q91_0824
Hypothetical protein.
       0.625
polI
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.582
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.