STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0879Hypothetical protein. (406 aa)    
Predicted Functional Partners:
Q91_0878
Hypothetical protein.
 
     0.915
Q91_0881
Multidrug efflux transporter.
 
     0.864
Q91_0971
Hypothetical protein.
  
     0.771
Q91_2239
Multidrug efflux transporter.
 
     0.770
Q91_2197
Exporter of the RND superfamily-like protein.
 
     0.733
Q91_2198
Glycosyl hydrolase, BNR repeat protein.
 
  
 0.656
Q91_2046
Exporter of the RND superfamily.
 
     0.614
Q91_2200
ABC-type dipeptide transport system, periplasmic component.
 
    0.588
Q91_0103
Resistance-Nodulation-Cell Division Superfamily transporter.
 
     0.583
Q91_2047
Exporter of the RND superfamily.
 
     0.583
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.