STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0915CsbD-like protein; Belongs to the UPF0337 (CsbD) family. (66 aa)    
Predicted Functional Partners:
Q91_0914
Hypothetical protein.
 
  
 0.974
Q91_0435
Transport-associated protein.
  
  
 0.640
Q91_0576
Phospholipid-binding domain family.
  
  
 0.640
Q91_0588
Putative cytosolic protein.
   
    0.634
Q91_1111
Hypothetical protein.
  
  
 0.633
Q91_0088
OsmC-like protein.
  
  
 0.596
Q91_0668
Sugar nucleotide epimerase YfcH protein.
   
    0.555
Q91_1000
Hypothetical protein.
  
  
 0.483
Q91_0916
Fatty acid cis/trans isomerase superfamily.
       0.427
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.