STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1047Hypothetical protein. (235 aa)    
Predicted Functional Partners:
Q91_2032
Diguanylate cyclase/phosphodiesterase with extracellular sensor.
 
 
 0.848
Q91_2027
Toxin ABC transporter ATPase and permease.
 
  
 0.803
Q91_2028
Type I protease secretion protein, hemolytica toxin secretion prtE family.
 
  
 0.794
Q91_2030
Outer membrane component of ABC transporter required for LapA secretion.
 
   
 0.791
Q91_1046
Pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
       0.773
Q91_2026
Hypothetical protein.
 
     0.765
Q91_2023
Type I secretion target GGXGXDXXX repeat protein domain protein.
 
   
 0.744
Q91_1048
RNA-binding S4 domain protein.
       0.727
Q91_2021
Outer membrane adhesin like proteiin.
 
   
 0.529
Q91_1044
Threonine synthase, pyridoxal-5'-phosphate-dependent enzyme; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
       0.511
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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