STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1143Fumarylacetoacetate hydrolase family protein. (282 aa)    
Predicted Functional Partners:
Q91_1355
AMP-dependent synthetase and ligase.
  
  
 0.620
gshA
Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
   
    0.579
Q91_1315
Glyoxalase family protein.
  
  
 0.550
Q91_1142
Hypothetical protein.
       0.542
pheA
Prephenate dehydratase domain protein.
     
 0.503
Q91_0696
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.492
hpaI
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, with PEP/pyruvate domain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.466
Q91_1144
Peptidase S24-like domain protein; Belongs to the peptidase S24 family.
       0.447
Q91_1667
Xylene monooxygenase electron transfer component.
  
  
 0.435
phnA4
PAH dioxygenase component ferredoxin reductase.
  
  
 0.435
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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