Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Q91_1151 | Q91_1152 | Q91_1151 | Q91_1152 | Hypothetical protein. | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | 0.783 |
Q91_1151 | Q91_1153 | Q91_1151 | Q91_1153 | Hypothetical protein. | ABC-type metal ion transport system, periplasmic component/surface adhesin. | 0.757 |
Q91_1151 | hisI2 | Q91_1151 | Q91_1150 | Hypothetical protein. | Phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.774 |
Q91_1151 | yeiR | Q91_1151 | Q91_1149 | Hypothetical protein. | GTPase. | 0.831 |
Q91_1152 | Q91_1151 | Q91_1152 | Q91_1151 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Hypothetical protein. | 0.783 |
Q91_1152 | Q91_1153 | Q91_1152 | Q91_1153 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | ABC-type metal ion transport system, periplasmic component/surface adhesin. | 0.876 |
Q91_1152 | hisI2 | Q91_1152 | Q91_1150 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.739 |
Q91_1152 | yeiR | Q91_1152 | Q91_1149 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | GTPase. | 0.819 |
Q91_1153 | Q91_1151 | Q91_1153 | Q91_1151 | ABC-type metal ion transport system, periplasmic component/surface adhesin. | Hypothetical protein. | 0.757 |
Q91_1153 | Q91_1152 | Q91_1153 | Q91_1152 | ABC-type metal ion transport system, periplasmic component/surface adhesin. | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | 0.876 |
Q91_1153 | hisI2 | Q91_1153 | Q91_1150 | ABC-type metal ion transport system, periplasmic component/surface adhesin. | Phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.726 |
Q91_1153 | yeiR | Q91_1153 | Q91_1149 | ABC-type metal ion transport system, periplasmic component/surface adhesin. | GTPase. | 0.800 |
Q91_1948 | rpsN | Q91_1948 | Q91_1702 | Zinc/manganese transport system substrate-binding protein. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.679 |
Q91_1948 | yeiR | Q91_1948 | Q91_1149 | Zinc/manganese transport system substrate-binding protein. | GTPase. | 0.784 |
Q91_2136 | map | Q91_2136 | Q91_1009 | Elongation factor P. | Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.746 |
Q91_2136 | rpsN | Q91_2136 | Q91_1702 | Elongation factor P. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.882 |
Q91_2136 | yeiR | Q91_2136 | Q91_1149 | Elongation factor P. | GTPase. | 0.809 |
dksA | yeiR | Q91_1501 | Q91_1149 | RNA polymerase binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | GTPase. | 0.728 |
folE2 | yeiR | Q91_1438 | Q91_1149 | GTP cyclohydrolase folE2; Converts GTP to 7,8-dihydroneopterin triphosphate. | GTPase. | 0.737 |
hisI2 | Q91_1151 | Q91_1150 | Q91_1151 | Phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | Hypothetical protein. | 0.774 |
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