Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Q91_0626 | Q91_1152 | Q91_0626 | Q91_1152 | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | 0.449 |
Q91_0626 | Q91_1355 | Q91_0626 | Q91_1355 | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | AMP-dependent synthetase and ligase. | 0.841 |
Q91_0626 | gltB | Q91_0626 | Q91_0060 | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | Glutamate synthase. | 0.556 |
Q91_0626 | polI | Q91_0626 | Q91_0199 | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.590 |
Q91_1151 | Q91_1152 | Q91_1151 | Q91_1152 | Hypothetical protein. | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | 0.783 |
Q91_1151 | Q91_1153 | Q91_1151 | Q91_1153 | Hypothetical protein. | ABC-type metal ion transport system, periplasmic component/surface adhesin. | 0.757 |
Q91_1151 | hisI2 | Q91_1151 | Q91_1150 | Hypothetical protein. | Phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.774 |
Q91_1151 | yeiR | Q91_1151 | Q91_1149 | Hypothetical protein. | GTPase. | 0.831 |
Q91_1152 | Q91_0626 | Q91_1152 | Q91_0626 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.449 |
Q91_1152 | Q91_1151 | Q91_1152 | Q91_1151 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Hypothetical protein. | 0.783 |
Q91_1152 | Q91_1153 | Q91_1152 | Q91_1153 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | ABC-type metal ion transport system, periplasmic component/surface adhesin. | 0.876 |
Q91_1152 | Q91_1355 | Q91_1152 | Q91_1355 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | AMP-dependent synthetase and ligase. | 0.500 |
Q91_1152 | birA | Q91_1152 | Q91_0318 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.488 |
Q91_1152 | gltB | Q91_1152 | Q91_0060 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Glutamate synthase. | 0.511 |
Q91_1152 | hisI2 | Q91_1152 | Q91_1150 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | Phosphoribosyl-AMP cyclohydrolase domain protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.739 |
Q91_1152 | polI | Q91_1152 | Q91_0199 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.469 |
Q91_1152 | rpoA | Q91_1152 | Q91_1691 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.686 |
Q91_1152 | yeiR | Q91_1152 | Q91_1149 | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | GTPase. | 0.819 |
Q91_1153 | Q91_1151 | Q91_1153 | Q91_1151 | ABC-type metal ion transport system, periplasmic component/surface adhesin. | Hypothetical protein. | 0.757 |
Q91_1153 | Q91_1152 | Q91_1153 | Q91_1152 | ABC-type metal ion transport system, periplasmic component/surface adhesin. | Transcriptional repressor of Zn transport system; Belongs to the Fur family. | 0.876 |
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