STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1200Membrane protein-like protein. (120 aa)    
Predicted Functional Partners:
nnrS
NnrS family protein.
       0.510
Q91_1201
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.499
Q91_1202
Oxidoreductase, short-chain dehydrogenase/reductase family.
       0.481
Q91_1203
enoyl-CoA hydratase/isomerase.
       0.432
Q91_1204
3-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.432
Q91_1205
Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.426
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.