STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1202Oxidoreductase, short-chain dehydrogenase/reductase family. (287 aa)    
Predicted Functional Partners:
Q91_1355
AMP-dependent synthetase and ligase.
  
 
 0.847
Q91_1201
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
   
  0.759
Q91_1204
3-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
0.730
Q91_1203
enoyl-CoA hydratase/isomerase.
  
  0.719
Q91_1205
Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
   0.695
atuD
citronellyl-CoA dehydrogenase involved in catabolism of citronellol.
  
  0.655
Q91_1206
AMP-dependent synthetase and ligase.
  
   0.596
Q91_1218
Hypothetical protein.
  
  
 0.562
Q91_1371
Malonyl CoA-acyl carrier protein transacylase.
 
 0.511
Q91_0998
Flavin-containing monooxygenase FMO.
  
 
 0.492
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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