STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1220Enoyl-CoA hydratase/isomerase family protein. (268 aa)    
Predicted Functional Partners:
Q91_1236
Hydroxymethylglutaryl-CoA lyase.
 
 
 0.989
accB1
Acetyl-CoA carboxylase carboxyltransferase.
 0.984
Q91_1219
Geranyl-CoA carboxylase, alpha-subunit.
 
 0.982
Q91_1355
AMP-dependent synthetase and ligase.
  
 
 0.904
atuD
citronellyl-CoA dehydrogenase involved in catabolism of citronellol.
 
 0.896
Q91_1218
Hypothetical protein.
  
  
 0.791
Q91_0626
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
 
 0.766
Q91_1427
Diguanylate cyclase.
  
 
 0.766
barA
Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A.
   
 
 0.763
rpmG
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.692
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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