STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1308Cobalt/zinc/cadmium efflux RND transporter,outermembrane protein. (436 aa)    
Predicted Functional Partners:
Q91_1309
Biotin/lipoyl attachment domain-containing protein.
 
 
 0.934
Q91_1310
Cobalt/zinc/cadmium efflux RND transporter,permease protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.928
Q91_1305
Cation efflux system permease.
 
   
 0.608
Q91_2028
Type I protease secretion protein, hemolytica toxin secretion prtE family.
  
 
 0.544
Q91_1307
Hypothetical protein.
       0.532
Q91_1099
Lipoprotein.
  
  
 0.520
Q91_0631
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.515
Q91_0108
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.509
Q91_0616
HlyD-family secretion protein, yhiI-like protein.
  
 
 0.509
Q91_0246
FMN-binding domain protein.
  
     0.465
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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