STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nodIABC-type multidrug transport system ATPase component. (310 aa)    
Predicted Functional Partners:
Q91_1379
Nod factor ABC transporter, permease protein.
 
 
 0.992
Q91_0111
ABC-type antimicrobial peptide transport system, permease component.
 
    
 0.841
Q91_1794
ABC transporter, permease protein.
  
 
 0.794
Q91_0618
ABC transporter, ATP-binding protein, permease.
 
  
 0.775
Q91_0009
Urea ABC transporter ATPase protein UrtD.
 
    
0.774
Q91_0524
ABC-type multidrug transport system, permease component.
  
 0.743
Q91_0110
ABC-type antimicrobial peptide transport system, permease component.
 
    
 0.664
atpD-1
H(+)-transporting two-sector ATPase, F(1) beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.619
atpA-1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.604
Q91_1355
AMP-dependent synthetase and ligase.
 
  
 0.548
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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