STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1424Hypothetical protein. (266 aa)    
Predicted Functional Partners:
Q91_1423
Citrate synthase-like protein.
 
     0.953
Q91_1422
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
   
 0.922
Q91_1425
TonB-dependent receptor.
 
     0.903
Q91_1428
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.867
sucC
Succinyl-CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.843
Q91_1355
AMP-dependent synthetase and ligase.
  
 
 0.807
Q91_0261
Aconitate hydratase 1 transmembrane protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.760
sucA
Oxoglutarate dehydrogenase, E1 component.
  
 
 0.759
Q91_1906
Dihydrolipoamide dehydrogenase protein.
  
 
 0.740
mdh
Malate dehydrogenase 1; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.702
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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