STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1570Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (743 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase 1; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.949
Q91_1092
Aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family.
  
 
 0.934
sucA
Oxoglutarate dehydrogenase, E1 component.
   
 
 0.913
gltB
Glutamate synthase.
     
 0.882
Q91_1171
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.851
Q91_0873
4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
  
 0.823
Q91_1689
Ferredoxin, 4Fe-4S; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
  
 0.823
Q91_1678
Glutamate dehydrogenase.
   
 
 0.811
gltD
Glutamate synthase, small subunit.
   
 
 0.804
argH
Argininosuccinate lyase 2.
     
 0.803
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.