STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1751Beta-lactamase; Belongs to the peptidase S11 family. (374 aa)    
Predicted Functional Partners:
mrdA
Penicillin binding protein transpeptidase domain protein; Catalyzes cross-linking of the peptidoglycan cell wall.
 
  
 0.936
Q91_0051
Multimodular transpeptidase-transglycosylase PBP 1A.
     
 0.920
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
      0.846
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      0.821
Q91_1753
Cytoplasmic protein; Belongs to the UPF0250 family.
  
    0.818
Q91_1752
Aminotransferase, class IV superfamily.
      0.806
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
   
 0.722
Q91_1749
Lytic murein transglycosylase B.
 
   
 0.722
Q91_1353
Transmembrane spore maturation-like protein.
  
  
 0.691
rlpA
Rare lipoprotein A-like double-psi beta-barrel; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.640
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.