STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_1765Carbamoyltransferase family. (577 aa)    
Predicted Functional Partners:
Q91_1775
Mn2+dependent serine/threonine protein kinase.
 
     0.792
waaP
Lipopolysaccharide kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
   
 0.771
waaG
UDP-glucose:LPS alpha 1,3-glucosyltransferase WaaG.
 
   
 0.732
Q91_1600
SdiA-regulated-like protein.
  
     0.731
Q91_1776
Heptosyl transferase I.
 
  
 0.609
Q91_1355
AMP-dependent synthetase and ligase.
 
   
 0.591
Q91_1766
Lipopolysaccharide kinase (Kdo/WaaP) family.
       0.557
Q91_1777
Lipopolysaccharide heptosyltransferase II.
 
  
 0.536
Q91_1767
Hypothetical protein.
       0.468
Q91_2074
Phosphoethanolamine transferase cptA.
 
     0.437
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.