Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Q91_0020 | Q91_1776 | Q91_0020 | Q91_1776 | Histidinol-phosphatase. | Heptosyl transferase I. | 0.677 |
Q91_0020 | Q91_1777 | Q91_0020 | Q91_1777 | Histidinol-phosphatase. | Lipopolysaccharide heptosyltransferase II. | 0.969 |
Q91_0020 | hldE | Q91_0020 | Q91_0173 | Histidinol-phosphatase. | Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.987 |
Q91_0175 | Q91_1776 | Q91_0175 | Q91_1776 | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Heptosyl transferase I. | 0.990 |
Q91_0175 | Q91_1777 | Q91_0175 | Q91_1777 | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Lipopolysaccharide heptosyltransferase II. | 0.956 |
Q91_0175 | hldE | Q91_0175 | Q91_0173 | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.803 |
Q91_0175 | rfaD | Q91_0175 | Q91_0174 | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.705 |
Q91_0175 | waaG | Q91_0175 | Q91_1769 | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | UDP-glucose:LPS alpha 1,3-glucosyltransferase WaaG. | 0.904 |
Q91_0175 | waaP | Q91_0175 | Q91_1768 | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Lipopolysaccharide kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. | 0.904 |
Q91_1774 | Q91_1775 | Q91_1774 | Q91_1775 | Hypothetical protein. | Mn2+dependent serine/threonine protein kinase. | 0.773 |
Q91_1774 | Q91_1776 | Q91_1774 | Q91_1776 | Hypothetical protein. | Heptosyl transferase I. | 0.773 |
Q91_1774 | Q91_1777 | Q91_1774 | Q91_1777 | Hypothetical protein. | Lipopolysaccharide heptosyltransferase II. | 0.773 |
Q91_1775 | Q91_1774 | Q91_1775 | Q91_1774 | Mn2+dependent serine/threonine protein kinase. | Hypothetical protein. | 0.773 |
Q91_1775 | Q91_1776 | Q91_1775 | Q91_1776 | Mn2+dependent serine/threonine protein kinase. | Heptosyl transferase I. | 0.941 |
Q91_1775 | Q91_1777 | Q91_1775 | Q91_1777 | Mn2+dependent serine/threonine protein kinase. | Lipopolysaccharide heptosyltransferase II. | 0.914 |
Q91_1775 | Q91_1803 | Q91_1775 | Q91_1803 | Mn2+dependent serine/threonine protein kinase. | NADH-ubiquinone oxidoreductase chain 9. | 0.659 |
Q91_1775 | waaG | Q91_1775 | Q91_1769 | Mn2+dependent serine/threonine protein kinase. | UDP-glucose:LPS alpha 1,3-glucosyltransferase WaaG. | 0.811 |
Q91_1775 | waaP | Q91_1775 | Q91_1768 | Mn2+dependent serine/threonine protein kinase. | Lipopolysaccharide kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. | 0.820 |
Q91_1776 | Q91_0020 | Q91_1776 | Q91_0020 | Heptosyl transferase I. | Histidinol-phosphatase. | 0.677 |
Q91_1776 | Q91_0175 | Q91_1776 | Q91_0175 | Heptosyl transferase I. | Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.990 |
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