STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrATrypsin-like serine protease; Belongs to the peptidase S1C family. (456 aa)    
Predicted Functional Partners:
pepN
Aminopeptidase N.
   
 
 0.806
moaB
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
  
    0.787
Q91_1070
Anti sigma-E protein, RseA.
  
 
 0.776
Q91_1922
Putative small membrane protein.
  
    0.776
Q91_1919
Hypothetical protein.
       0.737
Q91_1355
AMP-dependent synthetase and ligase.
  
 
 0.697
Q91_1924
Methylated-DNA-[protein]-cysteine S-methyltransferase.
  
   0.677
Q91_0484
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
  
  
 0.664
Q91_1918
cAMP-dependent protein kinase regulatory chain.
  
  
 0.535
Q91_1917
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenases.
       0.465
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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