STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abc3Zinc/manganese transport system permease protein. (250 aa)    
Predicted Functional Partners:
Q91_1948
Zinc/manganese transport system substrate-binding protein.
 
  
 0.996
Q91_1947
Hypothetical protein.
 
     0.917
Q91_1153
ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
  
 0.668
Q91_0617
ABC transporter, ATP-binding protein/permease.
    
 0.465
Q91_0626
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
     
 0.448
Q91_1427
Diguanylate cyclase.
     
 0.448
Q91_1645
ABC-type transport system, ATPase component.
     
 0.423
Q91_1950
Hypothetical protein.
       0.406
yeiR
GTPase.
  
  
 0.402
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.