Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Q91_2014Rh-like protein/ammonium transporter. (425 aa)    
Predicted Functional Partners:
Q91_2015
Regulatory protein for nitrogen assimilation by glutamine synthetase (ATase); Signal transduction protein, associated to amtB, ammonium transporter; Belongs to the P(II) protein family.
 
 0.997
glnK
Regulatory protein, P-II 2; For nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase); Belongs to the P(II) protein family.
 
 0.989
Q91_1780
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
    
 0.913
gltB
Glutamate synthase.
 
  
 0.854
Q91_1431
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
  
 0.793
Q91_0732
Cyclic diguanylate phosphodiesterase domain protein.
 
      0.788
Q91_1800
Nitrogen regulatory protein PII.
  
 
 0.744
ntrB
ATP-binding region, ATPase-like:Histidine kinase A.
  
 
 0.719
Q91_2130
Cyclic diguanylate phosphodiesterase domain protein.
 
      0.525
Q91_1093
Signal transduction histidine kinase.
  
 
 0.488
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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