Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Q91_2016Transmembrane protein. (228 aa)    
Predicted Functional Partners:
Q91_2017
Hypothetical protein.
       0.551
Q91_2018
Magnesium chelatase subunit-like ATPase.
       0.469
Q91_2014
Rh-like protein/ammonium transporter.
  
    0.448
Q91_2015
Regulatory protein for nitrogen assimilation by glutamine synthetase (ATase); Signal transduction protein, associated to amtB, ammonium transporter; Belongs to the P(II) protein family.
       0.443
Q91_1521
MFS metabolite transporter.
  
     0.414
Q91_1099
Lipoprotein.
  
     0.403
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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