STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_2028Type I protease secretion protein, hemolytica toxin secretion prtE family. (423 aa)    
Predicted Functional Partners:
Q91_2027
Toxin ABC transporter ATPase and permease.
 
 0.997
Q91_2030
Outer membrane component of ABC transporter required for LapA secretion.
 
 
 0.944
Q91_2026
Hypothetical protein.
 
     0.900
Q91_2023
Type I secretion target GGXGXDXXX repeat protein domain protein.
 
  
 0.844
Q91_2021
Outer membrane adhesin like proteiin.
 
  
 0.800
Q91_1047
Hypothetical protein.
 
  
 0.794
Q91_2031
Sulfate adenylyltransferase, small subunit.
 
  
 0.791
Q91_0177
Outer membrane protein, tolC-like protein.
 
 
 0.787
Q91_2032
Diguanylate cyclase/phosphodiesterase with extracellular sensor.
 
  
 0.775
Q91_2029
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  
 0.765
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.