STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_2194Transmembrane alkane 1-monooxygenase AlkB. (400 aa)    
Predicted Functional Partners:
adhC
Alcohol dehydrogenase GroES-like protein.
     
  0.900
Q91_2192
Aromatic-ring-hydroxylating dioxygenase beta subunit.
 
     0.638
Q91_2191
Thiolase/acyl transferase.
     
 0.592
Q91_1216
2,4-dienoyl-CoA reductase.
  
   
 0.591
Q91_2224
Extradiol dioxygenase.
  
     0.590
Q91_2189
Ibuprofen CoA ligase.
     
 0.588
Q91_2190
Hypothetical protein.
       0.588
Q91_2193
Ibuprofen CoA dioxygenase large subunit.
       0.588
Q91_0963
Biphenyl-2,3-diol 1,2-dioxygenase.
  
     0.575
Q91_0932
Extradiol dioxygenase.
  
     0.568
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.