STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD69935.1Predicted membrane protein. (241 aa)    
Predicted Functional Partners:
SFD86157.1
Signal transduction histidine kinase.
  
  
 0.721
SFD70002.1
Two component transcriptional regulator, LytTR family.
 
    0.685
SFD74538.1
Putative adhesin.
 
  
 0.649
SFD69973.1
Histidine kinase.
 
     0.618
SFE71932.1
Hypothetical protein.
  
     0.562
SFE90241.1
Hypothetical protein.
  
     0.531
SFF09912.1
Glycosyl transferase family 2.
  
     0.529
SFE80237.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
   
    0.473
SFE93881.1
Hypothetical protein.
  
     0.421
SFE20387.1
Acyltransferase.
  
     0.413
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.