STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD85336.1Protein of unknown function. (744 aa)    
Predicted Functional Partners:
SFF01590.1
Tetratricopeptide repeat-containing protein.
  
     0.675
SFD77409.1
Outer membrane protein assembly factor BamA.
  
 
   0.663
SFE69787.1
Sporulation related domain-containing protein.
  
 
 0.659
SFD85289.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.653
SFD84860.1
Hypothetical protein.
  
     0.636
SFD94835.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
     0.613
SFE02551.1
Sporulation related domain-containing protein.
  
   0.570
SFE87527.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.568
SFE93446.1
uroporphyrinogen-III synthase.
  
     0.557
SFE15957.1
Hypothetical protein.
  
     0.553
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.