STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE06246.1Y_Y_Y domain-containing protein. (962 aa)    
Predicted Functional Partners:
SFD78370.1
Starch-binding associating with outer membrane.
  
     0.734
SFD78404.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.727
SFE64856.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.666
SFD98779.1
PAS domain S-box-containing protein.
     
 0.657
SFE22224.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
     
 0.657
SFE13068.1
Starch-binding associating with outer membrane.
  
     0.643
SFE77659.1
PAS domain S-box-containing protein.
     
 0.626
SFE77305.1
Hypothetical protein.
     
 0.624
SFE41058.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.599
SFD86181.1
Two component transcriptional regulator, LuxR family.
  
 0.585
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.