STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE23889.1ABC-type transporter Mla maintaining outer membrane lipid asymmetry, component MlaD. (334 aa)    
Predicted Functional Partners:
SFE23947.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.
 
 0.982
SFE23976.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.974
SFE03578.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.925
SFE03608.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.887
SFE76843.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.838
SFE77271.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.838
SFD91871.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  
 
0.769
SFE23913.1
ABC-type transport auxiliary lipoprotein component.
  
  0.760
SFE92982.1
Chemotaxis protein MotB.
   
   0.707
SFE21602.1
Outer membrane protein insertion porin family.
  
    0.507
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.