STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAL-rhamnose isomerase; Belongs to the rhamnose isomerase family. (424 aa)    
Predicted Functional Partners:
SFE85044.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.983
SFE53630.1
Sugar (pentulose or hexulose) kinase.
  
 
 0.943
SFF05245.1
Xylulokinase.
  
 
 0.796
SFE53553.1
L-rhamnose-H+ transport protein.
 
  
 0.740
SFE53667.1
L-fuculose-phosphate aldolase.
  
  
 0.679
SFE53704.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
       0.604
SFD72369.1
Sugar phosphate isomerase/epimerase.
   
 
  0.546
SFE85244.1
Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase.
 
  
 0.454
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.