STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE80959.1Two component transcriptional regulator, LytTR family. (262 aa)    
Predicted Functional Partners:
SFE80997.1
Histidine kinase.
 
  0.971
SFE95952.1
Histidine kinase.
 
  0.881
SFD69973.1
Histidine kinase.
  
  0.845
SFE35522.1
Histidine kinase.
  
  0.845
SFE84048.1
Histidine kinase.
  
  0.845
SFE87133.1
Histidine kinase.
  
  0.845
SFE21047.1
Histidine kinase.
  
  0.843
SFE88084.1
Tetratricopeptide repeat-containing protein.
  
  0.836
SFD93078.1
Two component transcriptional regulator, LytTR family.
  
  
  0.797
SFE81033.1
Outer membrane protein TolC.
       0.753
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.