STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE84455.1ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. (96 aa)    
Predicted Functional Partners:
SFD78609.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
   
 
 0.908
SFD94635.1
ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family.
  
 
 0.850
clpB
ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.850
SFE68155.1
Hypothetical protein.
  
     0.767
clpP
ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.751
SFE51531.1
Hypothetical protein.
  
     0.732
SFE23745.1
Gliding motility-associated lipoprotein GldD.
  
     0.696
SFD71632.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
 
     0.675
SFD86395.1
Helix-turn-helix.
  
     0.643
SFE63019.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
     0.632
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.