STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE93537.1Glycosyltransferase involved in cell wall bisynthesis. (419 aa)    
Predicted Functional Partners:
SFE93563.1
Glycosyl transferase family 2.
    0.826
SFD79971.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.783
SFE93508.1
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.672
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.671
SFE55204.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 0.614
SFE00367.1
4-alpha-glucanotransferase.
     
 0.543
SFE81808.1
Glycosyltransferase involved in cell wall bisynthesis.
    0.529
SFD79913.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.514
SFE81895.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.492
SFE81709.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.469
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.