STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE93140.1ABC-type transport system, involved in lipoprotein release, permease component. (423 aa)    
Predicted Functional Partners:
SFE93171.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.964
SFE93071.1
Putative ABC transport system ATP-binding protein.
 
  0.935
SFE93042.1
Hypothetical protein.
 
     0.832
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.801
SFE93209.1
Transcriptional regulator, TetR family.
 
     0.712
SFE93104.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
    
0.665
SFE13845.1
Putative ABC transport system ATP-binding protein.
   
  0.651
SFE19614.1
ABC-type lipoprotein export system, ATPase component.
   
  0.651
SFE44684.1
ABC-type lipoprotein export system, ATPase component.
   
  0.651
SFE86918.1
Putative ABC transport system ATP-binding protein.
   
  0.651
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.