Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFD68278.1 | SFD68307.1 | SAMN05444380_10116 | SAMN05444380_10117 | Anthranilate synthase component 1. | Anthranilate synthase, component II. | 0.999 |
| SFD68278.1 | SFE63506.1 | SAMN05444380_10116 | SAMN05444380_11516 | Anthranilate synthase component 1. | Branched-chain amino acid aminotransferase. | 0.478 |
| SFD68278.1 | SFF04821.1 | SAMN05444380_10116 | SAMN05444380_1305 | Anthranilate synthase component 1. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase. | 0.904 |
| SFD68278.1 | SFF04939.1 | SAMN05444380_10116 | SAMN05444380_1309 | Anthranilate synthase component 1. | Para-aminobenzoate synthetase component 1. | 0.803 |
| SFD68278.1 | aroC | SAMN05444380_10116 | SAMN05444380_104174 | Anthranilate synthase component 1. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.911 |
| SFD68278.1 | trpA | SAMN05444380_10116 | SAMN05444380_10122 | Anthranilate synthase component 1. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.934 |
| SFD68278.1 | trpC | SAMN05444380_10116 | SAMN05444380_10119 | Anthranilate synthase component 1. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.996 |
| SFD68278.1 | trpD | SAMN05444380_10116 | SAMN05444380_10118 | Anthranilate synthase component 1. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
| SFD68278.1 | trpF | SAMN05444380_10116 | SAMN05444380_10120 | Anthranilate synthase component 1. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.969 |
| SFD68307.1 | SFD68278.1 | SAMN05444380_10117 | SAMN05444380_10116 | Anthranilate synthase, component II. | Anthranilate synthase component 1. | 0.999 |
| SFD68307.1 | SFE63506.1 | SAMN05444380_10117 | SAMN05444380_11516 | Anthranilate synthase, component II. | Branched-chain amino acid aminotransferase. | 0.532 |
| SFD68307.1 | SFF04821.1 | SAMN05444380_10117 | SAMN05444380_1305 | Anthranilate synthase, component II. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase. | 0.901 |
| SFD68307.1 | SFF04939.1 | SAMN05444380_10117 | SAMN05444380_1309 | Anthranilate synthase, component II. | Para-aminobenzoate synthetase component 1. | 0.999 |
| SFD68307.1 | aroC | SAMN05444380_10117 | SAMN05444380_104174 | Anthranilate synthase, component II. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.915 |
| SFD68307.1 | tilS | SAMN05444380_10117 | SAMN05444380_1308 | Anthranilate synthase, component II. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.436 |
| SFD68307.1 | trpA | SAMN05444380_10117 | SAMN05444380_10122 | Anthranilate synthase, component II. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.987 |
| SFD68307.1 | trpC | SAMN05444380_10117 | SAMN05444380_10119 | Anthranilate synthase, component II. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.999 |
| SFD68307.1 | trpD | SAMN05444380_10117 | SAMN05444380_10118 | Anthranilate synthase, component II. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
| SFD68307.1 | trpF | SAMN05444380_10117 | SAMN05444380_10120 | Anthranilate synthase, component II. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.991 |
| SFE63506.1 | SFD68278.1 | SAMN05444380_11516 | SAMN05444380_10116 | Branched-chain amino acid aminotransferase. | Anthranilate synthase component 1. | 0.478 |
page 1 of 5