STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF05839.1Starch-binding associating with outer membrane. (523 aa)    
Predicted Functional Partners:
SFF05868.1
TonB-linked outer membrane protein, SusC/RagA family.
     0.914
SFF05787.1
BNR repeat-like domain-containing protein.
 
    0.871
SFD78404.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.821
SFE07213.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.810
SFE27471.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.787
SFD73522.1
Lysophospholipase L1.
    
  0.757
SFD69052.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.755
SFF03237.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.750
SFE83520.1
Iron complex outermembrane recepter protein.
  
     0.741
SFE64856.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.738
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.