STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF05787.1BNR repeat-like domain-containing protein. (582 aa)    
Predicted Functional Partners:
SFF05805.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
    0.962
SFF05839.1
Starch-binding associating with outer membrane.
 
    0.871
SFF05868.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.763
SFE21543.1
Tetratricopeptide repeat-containing protein.
  
     0.667
SFF12530.1
Transposase DDE domain group 1.
  
     0.637
SFF10717.1
Hypothetical protein.
  
     0.624
SFE60312.1
Hypothetical protein.
  
  
  0.619
SFE58350.1
Phosphotransferase enzyme family protein.
    
  0.599
SFE54054.1
Protein of unknown function.
  
     0.598
SFE64883.1
SusD family protein.
  
    0.580
Your Current Organism:
Thermophagus xiamenensis
NCBI taxonomy Id: 385682
Other names: Anaerophaga sp. HS1, CGMCC 1.5071, DSM 19012, Marinilabiaceae bacterium HS1, T. xiamenensis, Thermophagus xiamenensis Gao et al. 2013, strain HS1
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