Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
qoxDQuinol oxidase AA3, subunit IV. (110 aa)    
Predicted Functional Partners:
qoxA
Cytochrome AA3 quinol oxidase, subunit II; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.
 
 0.999
qoxB
Cytochrome aa3 quinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
qoxC
Cytochrome aa3 quinol oxidase, subunit III.
 
 0.999
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
 
 
 0.994
lwe2535
Conserved hypothetical protein.
  
     0.629
lwe1813
Conserved hypothetical protein.
  
     0.607
cydB
Cytochrome d ubiquinol oxidase, subunit II.
     
 0.607
cydA
Cytochrome d ubiquinol oxidase, subunit I.
     
 0.607
lwe1541
Conserved hypothetical protein.
  
     0.592
hepS
Heptaprenyl diphosphate synthase component I, putative.
  
     0.554
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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