STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0023Transcriptional regulator, GntR family. (246 aa)    
Predicted Functional Partners:
lwe2023
Transcriptional regulator, GntR family.
  
    0.775
lwe2024
Transcriptional regulator, GntR family.
  
     0.774
lwe0025
PTS system, mannose/fructose/sorbose family, IIB component.
  
    0.768
lwe0926
Transcription regulator, GntR family.
  
    0.768
lwe0024
PTS system, fructose family, IIA component.
  
    0.765
lwe1272
Transcriptional regulator, GntR family.
  
     0.761
lwe0028
Sugar isomerase domain protein; Belongs to the UPF0309 family.
 
    0.732
lwe0027
PTS system, mannose/fructose/sorbose family, IID component.
  
    0.715
lwe0026
PTS system, mannose/fructose/sorbose family, IIC component.
  
    0.706
lwe0731
Transcriptional regulator.
  
     0.612
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.