STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0028Sugar isomerase domain protein; Belongs to the UPF0309 family. (234 aa)    
Predicted Functional Partners:
lwe0026
PTS system, mannose/fructose/sorbose family, IIC component.
 
     0.780
lwe0027
PTS system, mannose/fructose/sorbose family, IID component.
 
     0.765
lwe0023
Transcriptional regulator, GntR family.
 
    0.732
lwe0025
PTS system, mannose/fructose/sorbose family, IIB component.
 
     0.706
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.675
lwe2599
PTS system, lactose/cellobiose specific IIB subunit.
 
    0.651
lwe0024
PTS system, fructose family, IIA component.
       0.646
lwe2597
Phosphotriesterase family protein.
 
     0.605
lwe2598
Putative membrane protein.
 
     0.590
lwe0366
DeoR/PRD/PTS regulatory domain protein.
 
    0.554
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.