STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0030PTS system, beta-glucoside-specific, IIABC component. (634 aa)    
Predicted Functional Partners:
ptsH
PTS phosphocarrier protein Hpr.
  
 0.981
lwe0278
PTS system, beta-glucoside-specific IIABC component.
 
 
0.958
lwe0269
PTS system, beta-glucoside-specific IIABC component.
 
 
0.956
lwe2719
PTS system, beta-glucoside-specific, IIABC component.
 
 
0.955
fruA
PTS system, fructose-specific, IIABC component.
  
  
 0.932
licT
Transcription antiterminator.
 
 0.903
lwe2720
Transcription antiterminator, BglG family.
 
 0.901
treB
PTS system, trehalose-specific, IIBC component.
 
 
0.900
lwe0268
Transcription antiterminator, putative.
 
 0.899
lwe1676
PTS system IIBC protein.
 
 
0.899
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.