STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0039Accessory gene regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family. (204 aa)    
Predicted Functional Partners:
lwe0041
Sensor histidine kinase, accessory gene regulator protein C, putative.
 
 
 0.991
lwe0040
Accessory gene regulator protein D, putative.
  
    0.925
lwe0042
2-components response regulator protein, AlgR/VirR/ComE type.
 
  
 0.849
lwe0454
Putative secreted protein.
  
     0.724
lwe0554
Putative secreted protein.
  
     0.710
lwe2300
Putative membrane protein.
  
  
 0.690
lwe1355
Putative lipoprotein.
  
     0.686
lwe0093
Chitinase B.
  
     0.670
lwe1818
Peptidoglycan bound protein (LPXTG motif), putative.
  
     0.666
chb
Chitin-binding protein/carbohydrate-binding protein.
  
     0.647
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.