Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
lwe00422-components response regulator protein, AlgR/VirR/ComE type. (242 aa)    
Predicted Functional Partners:
lwe0041
Sensor histidine kinase, accessory gene regulator protein C, putative.
 
 
 0.998
lwe0039
Accessory gene regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
 
   
 0.841
rplI
50S ribosomal protein L9; Binds to the 23S rRNA.
 
     0.532
lwe0787
Two-component sensor histidine kinases, putative.
 
  
 0.522
lwe2134
ABC transporter, permease protein.
 
     0.489
lwe0043
DHH subfamily 1 protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
       0.463
lwe0266
Serine protease.
  
  
 0.456
lwe1763
ABC transporter, permease protein.
  
    0.456
lwe0967
LytR/AlgR family response regulator, putative.
  
     0.442
lwe1291
DNA processing protein, Smf family.
      
 0.427
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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