STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe00422-components response regulator protein, AlgR/VirR/ComE type. (242 aa)    
Predicted Functional Partners:
lwe0041
Sensor histidine kinase, accessory gene regulator protein C, putative.
 
 
 0.998
lwe0039
Accessory gene regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
 
  
 0.849
lwe0787
Two-component sensor histidine kinases, putative.
 
  
 0.605
rplI
50S ribosomal protein L9; Binds to the 23S rRNA.
 
     0.533
lwe2031
Sensor histidine kinase.
 
  
 0.506
lwe2134
ABC transporter, permease protein.
 
     0.490
lwe0043
DHH subfamily 1 protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
       0.463
lwe1763
ABC transporter, permease protein.
 
     0.458
lwe0040
Accessory gene regulator protein D, putative.
  
    0.442
lwe0967
LytR/AlgR family response regulator, putative.
  
     0.442
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.