Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lwe0047WXG domain protein; Belongs to the WXG100 family. (97 aa)    
Predicted Functional Partners:
lwe0051
Conserved hypothetical protein.
 
  
 0.964
lwe0052
FtsK/SpoIIIE family protein.
 
 
 0.954
lwe0048
Putative membrane protein.
 
   
 0.891
lwe0050
Conserved hypothetical protein; Belongs to the EsaB family.
     
 0.692
lwe0770
FtsK/SpoIIIE family protein.
  
 
 0.686
lwe1402
FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.686
lwe1622
FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.686
lwe0713
Hypothetical protein.
 
     0.636
lwe1937
Hypothetical protein.
 
     0.610
lwe2065
Conserved hypothetical protein.
 
     0.610
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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