STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0048Putative membrane protein. (1080 aa)    
Predicted Functional Partners:
lwe0051
Conserved hypothetical protein.
 
  
 0.959
lwe0052
FtsK/SpoIIIE family protein.
 
  
 0.938
lwe0047
WXG domain protein; Belongs to the WXG100 family.
 
   
 0.891
lwe0049
Putative secreted protein.
  
  
 0.871
lwe0050
Conserved hypothetical protein; Belongs to the EsaB family.
  
  
 0.855
lwe0454
Putative secreted protein.
  
     0.757
lwe2593
Conserved hypothetical protein.
  
     0.730
lwe0431
Peptidoglycan linked surface protein, putative.
  
    0.724
hepS
Heptaprenyl diphosphate synthase component I, putative.
  
     0.718
lwe1355
Putative lipoprotein.
  
     0.717
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.