STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0055Hypothetical protein. (458 aa)    
Predicted Functional Partners:
lwe0053
Hypothetical protein.
       0.773
lwe0054
Hypothetical protein.
       0.773
lwe0051
Conserved hypothetical protein.
       0.735
lwe0052
FtsK/SpoIIIE family protein.
       0.715
lwe0050
Conserved hypothetical protein; Belongs to the EsaB family.
       0.669
lwe0048
Putative membrane protein.
       0.602
lwe0049
Putative secreted protein.
       0.602
lwe0056
Putative membrane protein.
     
 0.563
lwe1179
ABC transporter, permease protein.
  
 
 0.556
smc
Chromosome segregation SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.455
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.