Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lwe0076D-isomer specific 2-hydroxyacid dehydrogenase family protein. (318 aa)    
Predicted Functional Partners:
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.869
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.768
lwe0075
Pentapeptide repeats domain protein.
  
    0.562
garK-2
Glycerate kinase 2; Belongs to the glycerate kinase type-1 family.
     
 0.460
lwe2348
HAD-superfamily hydrolase, subfamily IIA.
  
  
 0.451
tal
Transaldolase, putative; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
   
  
 0.424
lwe0610
Transaldolase, putative.
   
  
 0.424
tal-2
Transaldolase, putative; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
   
  
 0.424
lwe1650
Aldehyde-alcohol dehydrogenase protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.423
lwe0900
Putative membrane protein.
   
    0.421
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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