STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0080Cell wall surface anchor family protein. (2012 aa)    
Predicted Functional Partners:
lwe2343
Cell wall surface anchor family protein.
 
 
 0.796
lwe0430
Putative membrane protein.
 
 
 0.791
lwe0471
Cell wall surface anchor (LPXTG motif) family protein.
 
   
 0.789
lwe0554
Putative secreted protein.
  
   
 0.782
lwe0580
LRR-and LPXTG-motif cell wall anchor domain protein.
 
   
 0.782
lwe0919
Conserved hypothetical protein.
 
  
 0.779
lwe2742
Conserved hypothetical protein.
  
  
 0.779
lwe1430
Cell wall surface anchor family protein (LPXTG motif).
 
 
 0.773
lwe2107
DNA-binding protein.
  
     0.772
lwe0542
Conserved hypothetical protein.
 
 
 0.771
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.