STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0087Pyruvyl-transferases domain protein. (505 aa)    
Predicted Functional Partners:
tarJ
Alcohol dehydrogenase, zinc-dependent; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.
 
     0.622
tarI
Nucleotidyltransferase family protein; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate.
 
     0.518
lwe0088
Transcriptional regulator, ArsR family.
       0.508
tagB
Teichoic acid biosynthesis protein B.
 
     0.447
tagH
Techoic acid ABC transporter, ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
   
 0.446
nifJ
Pyruvate-flavodoxin oxidoreductase.
      
 0.414
lwe1761
Conserved hypothetical protein.
 
  
 0.414
tagG
Techoic acid ABC transporter, efflux permease.
 
   
 0.413
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.